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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900220.1_cds_XP_016450267.1_44739
CDS Infomation

[gene=LOC107775100] [db_xref=GeneID:107775100] [protein=tryptophan--tRNA ligase, chloroplastic/mitochondrial-like isoform X2] [protein_id=XP_016450267.1] [location=complement(join(112560..112694,113781..113870,115026..115107,115327..115373,116949..117005,117132..117197,117295..117316,117451..117563,117800..117871,119166..119288,119370..119459,120940..120981,122685..122772,123956..124102,124197..124264))] [gbkey=CDS]
Sequence

ATGGGCCGTTCTCTACTCTCTCATTTCAGTATGGTCACTTATTCTGCTCCTCGCTTCGCC
TCTTCCACGTCACGCGGATTAAGTTTAGGTAAATACTTGAGAAGACCACAGCTAATTCGT
CAACATAATTTACAAGCCGGTCGAGATTTTCGGTGCCTTTGCAGTGTAGCTGTCTCTGAA
CCTGTTAATTCTGAGTCTTCTTCAAACCCTGTAAAGAAGAGAATAGTCTCCGGTGTTCAG
CCTACAGGATTGATACATTTGGGAAATTATCTTGGTGCCATAAAGAACTGGATACGCTTG
CAGGATACACATGAGACATTCTTCTTCATTGTGGACCTTCATGCGATAACTTTGCCATTT
GACGCACAACAATTGCTAAGGTCAACAAGGGATACAGCAGCTATTTATTTAGCATGTGGT
GTGGATCCTTCTAAGGCTTCAGTCTTTGTGCAGTCTCATGTCCGTGCTCATGTAGAGTTG
ATGTGGCTTTTGAGTTCTGCAACACCTATTGGTTGGCTCAACAGGATGATTCAATTTAAA
GAGAAATCACGGAAGGCGGGGGATGAAAATGTGGGTGTTGCCCTTCTAACCTATCCTGTG
CTAATGGCTGCTGATATTCTTCTGTACCAGTCTGATTTTGTCCCTGTTGGAGAGGATCAG
AAGCAACACCTGGAGTTGACACGAGAGCTGGCTGAGCGTGTTAACTATTTATATGGAGGA
AGGAAGTGGAAGAAACTGGGAGGGAGAGGCGGTTCAATCTTCAAGGTTCCTGAACCTCTT
ATTCCACCCGCTGGGGCTCGAATCATGTCCCTTACTGATGGTCTTTCCAAGATGTCGAAG
TCAGCACCATCTGATCAGTCGAGAATCAATTTGCTAGATTCAAAAGATGTAATAGCAAAT
AAAATAAAACGGTGCAAGACTGATTCGTTTCCTGGCATGGAGTTTGACAATCCGGAAAGA
CCTGAATGTAACAATCTTCTTTCTATTTATCAGCTAGTTACAGGCAAGACCAAGCAGGAG
GTTGCAGAAGAATGCAGAGATATGAATTGGGGAACGTTCAAACTCGTGCTTACAGATGCT
TTAGTTGATCATCTACACCCTATCCAGGCACGCTATGAGGAAATTGTATCCGACACGAGT
TACTTGGATGGAGTCTTGGCAGAGGGAGCCAGAAAAGCAGCAGATGTAGCCGATGTTACT
GTCAATAATGTCTACCAGGCAATGGGATTCTTGAGGAGATGA

Peptide Sequence

PEP ID

XP_016450267.1
PEP Infomation

PREDICTED: tryptophan--tRNA ligase, chloroplastic/mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MGRSLLSHFSMVTYSAPRFASSTSRGLSLGKYLRRPQLIRQHNLQAGRDFRCLCSVAVSE
PVNSESSSNPVKKRIVSGVQPTGLIHLGNYLGAIKNWIRLQDTHETFFFIVDLHAITLPF
DAQQLLRSTRDTAAIYLACGVDPSKASVFVQSHVRAHVELMWLLSSATPIGWLNRMIQFK
EKSRKAGDENVGVALLTYPVLMAADILLYQSDFVPVGEDQKQHLELTRELAERVNYLYGG
RKWKKLGGRGGSIFKVPEPLIPPAGARIMSLTDGLSKMSKSAPSDQSRINLLDSKDVIAN
KIKRCKTDSFPGMEFDNPERPECNNLLSIYQLVTGKTKQEVAEECRDMNWGTFKLVLTDA
LVDHLHPIQARYEEIVSDTSYLDGVLAEGARKAADVADVTVNNVYQAMGFLRR

Transcript Sequence

Gene sequence data has not been registered.